Tools

• Adjusted rand index
• Association
• Categorical association
• Clustering
• Cluster metrics
• Differential expression
• Negative binomial GLM differential expression
• Gene-Category association
• Gene-gene correlations
• GSEA preranked
• Leiden resolution scan
• List enrichr libraries
• Neighbors
• Obs-Category association
• Obs-Obs correlation matrix
• Pairwise posthoc
• Partial correlations
• Principal Component Analysis
• PCA loadings
• Plot Correlation heatmap
• Plot Correlation scatter
• Posthoc per gene
• Rank genes categorical
• Rank genes groups
• Score genes
• Score cell cycle genes
• Score genes from a dictionary of genes
• Top gene-gene correlations
• Top Gene-Obs correlations
• Top Obs-Obs correlations
• UMAP embedding
• UMAP graph